specimen.cmpb package

This subpackage contains everything needed for the CMPB pipeline.

specimen.cmpb submodules

specimen.cmpb.workflow

Running the CarveMe-ModelPolisher-based (CMPB) workflow.

specimen.cmpb.workflow.run(configpath: str | None = None)[source]

Run the CarveMe-ModelPolisher-based (CMPB) workflow.

Args:
  • configpath (Union[str,None]):

    The Path to a configuration file. If none given, prompts the user to enter the needed information step by step. Defaults to None.

specimen.cmpb.workflow.wrapper()[source]

Run given settings for the CarveMe-ModelPolisher-based (CMPB) workflow on multiple models.

Note

This function is not yet implemented. It is a placeholder for future development.

Note

Will be coming in a future release.