specimen.hqtb.core package
==========================

specimen.hqtb.core.refinement subpackage
----------------------------------------

specimen.hqtb.core.refinement.annotation submodule
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.refinement.annotation
   :members:
   :undoc-members:
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specimen.hqtb.core.refinement.cleanup submodule
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.refinement.cleanup
   :members:
   :undoc-members:
   :show-inheritance:

specimen.hqtb.core.refinement.extension submodule
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.refinement.extension
   :members:
   :undoc-members:
   :show-inheritance:

specimen.hqtb.core.refinement.smoothing submodule
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.refinement.smoothing
   :members:
   :undoc-members:
   :show-inheritance:


specimen.hqtb.core submodules
-----------------------------


specimen.hqtb.core.analysis 
^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.analysis
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   :undoc-members:
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specimen.hqtb.core.bidirectional\_blast
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.bidirectional_blast
   :members:
   :undoc-members:
   :show-inheritance:

specimen.hqtb.core.generate\_draft\_model 
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.generate_draft_model
   :members:
   :undoc-members:
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specimen.hqtb.core.validation 
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

.. automodule:: specimen.hqtb.core.validation
   :members:
   :undoc-members:
   :show-inheritance: